Explore the BICCN data with a tutorial.

For BICCN data access in FireCloud,  a quick registration (< 1 minute) is required.

NeMO - Broad Transcriptome Analysis

A main goal of the BCDC is bringing BICCN data to the community and to facilitate its use and analysis.  To help users get started we have prepared a sample analysis workflow whereby you can

• Access single cell transcriptomic data from the NeMO archive (https://nemoarchive.org/),
• Upload that data into the Broad FireCloud Single Cell Portal Environment (https://software.broadinstitute.org/firecloud/),
• Run an analysis pipeline,
• Prepare the output as an interactive study in the FireCloud portal.

Moving forward, we will automate and increase the integration of the NeMO and FireCloud/Single Cell Portal Environments. Currently, this demo focuses on running single cell transcriptomics data (specifically 10X v2).

NeMO Archive (NeMOarchive, RRID:SCR_016152)